PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004485895.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family Trihelix
Protein Properties Length: 306aa    MW: 34856 Da    PI: 5.1526
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004485895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.72e-1521112187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     +W+++   +L++a  ++  +l+rg+l++++W++v++++     + ++ +r+ +qCk++++ ++k+yk +k++ ++ +  +ss++p+f++l+a
  XP_004485895.1  21 CWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGVVSSSWPFFERLDA 112
                     7****************************************99999*****************************99999*********985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138378.9E-2619113No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MPDFHDSLTP PSRPVPVRED CWSEEASSTL VDAWGRRYLE LNRGNLRQKD WQDVADAVNA  60
LHGHTKKTHR TDVQCKNRID TIKKKYKIEK ARVSSSNGVV SSSWPFFERL DALIGPNFSA  120
KKSSSSPSPS PPVALPLLPH RKFHPSLPAI SVPPTAVALP QKRSIAAAMD NGYFRRNYSA  180
VAAAAAAAEA DEEEEEEEEE EVEEEEEVEV EVEEHEHEEE GRGSEVEEGD KEREGMKRLA  240
KAIEKFGEMY ERVEGQKLRQ MVDLEKQRMQ FAKDLEVQRM KMFMDTQVQL ERIKRGKRSG  300
SNDMYS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150387e-81AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004485895.10.0PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLI1M1T81e-161I1M1T8_SOYBN; Uncharacterized protein
STRINGGLYMA13G30280.11e-161(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-37sequence-specific DNA binding transcription factors